Awesome San Diego restuarants. This isn't exhaustive and I'll come back to add more later. I'll do beer/bars separately as well. If you can get more specific with what you like I can narrow things down for you.
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The Cottage in La Jolla. Chill brunch spot that's a good way to start a day out in La Jolla. You can park in nearby residential, walk to The Cottage, and then explore La Jolla by foot. It's a rich person beach side enclave. Killer stuffed french toast. Killer brick pressed chicken and mango quesadilla.
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Fig Tree Cafe. There are actually three locations: Pacifc Beach (original), Hillcrest, and Liberty Station. I prefer Pacific Beach but you can have a good time at any. Another breezy brunch spot. Dinner menu is modern Italian fare but I think they went in a different direction recently because it was kind of a jarring transition. Haven't been for dinner in a two or three months so I'm not too sure what's going on right now, but that was the conversation at the time.
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Alforon's. Amazing little Lebanese place with hands down my favorite dessert in San Diego, Aaysh Essaraya. Run by one of the nicest, sweetest couples you could ever imagine. They're going to chat you up and they are totally going to force you to eat more than you order--gratis. TIP THEM WELL, these people are sweethearts and deal with the worst of the worst in food patronage: SDSU students. Brighten their day damn it.
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Hash House A-Go-Go. Hash House is kind of a gimmick, but it's a gimmick that works. Massive servings of food. Like, you definitely won't be able to finish size massive. The quality isn't something to rave about, but it's a cool place to experience and they serve pretty good chicken and waffles. Decent menu any time of the day.
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Phil's BBQ. Phil's is a love or hate type place. There are people out there that are OBSESSED with it. My boss grabs Phil's probably three times a week for lunch. There are also people who scream from high heaven about how overrated it is. Personally, I think Phil's is very, very, very, very good and the best BBQ in California. You want the El Toro (tri-tip sandwich) or ribs. The line will probably be 25 - 40 minutes long. You have to be willing to deal with it, or place an order to go and eat elsewhere.
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George's California Modern and
George's Ocean Terrace. Decidedly fancier fare than what I've posted so far. Ocean Terrace is less expensive by a country mile, and less experimental. California Modern is exactly what the name implies: fresh, rotating California modern dishes changed out every few days. Ocean Terrace is probably my favorite dining experience in San Diego. Amazing, unbeatable view of the La Jolla coast.
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Punjabi Tandoor. For real, without question, not even an argument the best Indian food in California. The best Indian food not in India tbh. Amazing. You DEFINITELY want to get the Rogan Josh.
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The Steakhouse at Azul. The best steak in San Diego. A view that competes heavily with George's. To be fair, it's maybe thirty feet down the street from George's and is literally the same view with a bit less elevation, but it's gorgeous either way. Amazing waitstaff. They will take care of you and do it with a smile. Prepare to empty your wallet in graciousness for tip.
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Pizzeria Mozza. Just opened! JUST OPENED! JUST OPENED!!!! Pizzeria Mozza is without question. Without a doubt in my mind. Without any argument in the whole world. THE BEST PIZZA IN AMERICA. I will argue this all day long. I have eaten at every major pizza establishment on the west coast, a fair amount of them in the mountain and mid-west, and a few in the southwest. Pizzeria Mozza is pizza perfection. The only place to come close for me was Pizzeria Bianco in Phoenix. You MUST eat here. A heads up, I haven't gotten a chance to swing by the San Diego location (in Seaport Village, a place you might want to visit anyway). This is indicative of the Los Angeles location.
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Snooze. Snooze has dope ass breakfast.
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The Original Pancake House. The Original Pancake House has dope ass breakfast. EXCEPT the French Toast. It's awful. Get the dutch pancake.
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The Kebab Shop. This is a chain of places in San Diego. They sell doner kebabs. If you haven't had a doner kebab, you're about to have a life changing revelation. If you have had a doner kebab, you already know that you want to eat here. You want the lamb doner with fries.
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Lucha Libre. Lucha inspired burrito and taco joint. You want a California burrito. Off chance that you'll see wrestling stars on a given day.
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El Zarape. The best Mexican in San Diego. RIP shrimp burrito, you will be mourned. But a California burrito from El Zarape is still as good a way to spend a meal as any other.
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Bonnie Jean's. Do you like soul food? Are you not intimated by being in semi-shady neighborhoods? Bonnie Jean's is the place for you! Wonderful food. Really great, personal service. Unforgettable mashed potatoes. At least order to go and swing by.
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Cafe 21. Pretty chill place to spend the day. Just an enjoyable dining experience with above average food.
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Burger Lounge. Burger Lounge is the San Diego equivalent to Shake Shack, only like...five thousand times better. Burger Lounge makes the burger of the God's. Several locations dotted across the city. Go at least once.
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Hodad's. Real talk...I don't even like Hodad's that much. Sorry people reading this. But it is a San Diego establishment of importance. People seem to enjoy it a lot. And they have pretty good burgers. Just be warned: some of the worst service I have ever had in my entire life has been at Hodad's. Repeatedly. Consistently.
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Vallarta's Mexican Eatery. Is it after midnight? Do you want a fat ass burrito and a bomb plate of carne asada fries? Check it ouuuuut. Vallarta's isn't going to fool anyone into thinking it's the best of anything, but it fills a niche. And that niche is "I drank all night OH GOD BURRITO TIME". PS: people need to stop saying "generic hole in the wall places make the best Mexican!" and "anywhere ending in -berto's will be great!". That's how we send people to Riggoberto's, folks. And nobody wants that. Some of the worst folksy advice anyone could ever give.
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Underbelly. It's ramen. It's really good ramen. Asian food, surprisingly enough, isn't that great in San Diego. You have to head north to Los Angeles really. But this place...pretty good.
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Manna. Yo I know I just said that Asian food in SD isn't all that, but Manna is REAL good. Very good. LA/SF quality good. Wouldn't be a standout in either city, but would be a place you'd visit from time to time.
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Bertrand at Mister A's. Overrated. Overpriced. Above average food. But...check out the view. If you have a girlfriend, this is one of the most romantic spots in San Diego. Eat out on the patio for brunch and save yourself some cash.
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Urban Plate. It's great, it's healthy, and you won't feel like a bloated walking corpse after you eat it.
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Extraordinary Desserts. Whatever man. I'm throwing this in with the Hodad's caveat: I, personally, don't fucking get it. But enough people I respect love it and I would be doing you a disservice by not mentioning it. Just prepare to choke on dark chocolate filled abomin....no it's not that bad. But almost!
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Prado. Dat Tortilla Soup. Excellent food. Excellent service. And adjacent to Balboa Park, which is a place you'll want to swing by for a day.
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I gotta get back to work but off the top of my head those are my favorite places in San Diego. I KNOW that I'm missing a ton though, I'll try to fill it out as the day goes on. Beer/bars to come as well. Then venues and attractions.