You literally said "it happens a lot" in relation to evidence being destroyed. For you to make a statement like this I take it you must have a lot of experience with this sort of thing?
There is no reason to not believe the victim but there is also no reason to go balls deep in wacky conspiracies that would require large numbers of people to be involved in order to pull it off successfully.
Not at all, there are always fringe cases. However, purging evidence is the most unlikely scenario in this kind of situation. In order to do that you would need to involve people outside of HR and the management who were involved in the decision to dismiss him (for a start you would then need to start involving IT). It would also need to be a huge issue that already implicates everybody in order to get that many people on board without risk of them speaking out.
It's a huge reach to say "they only say there's no evidence because they deleted it hur hur". There are other reasons that are much more simple than that which could have led to them having no evidence about this incident.
And speaking as from a Head of IT (similar role to a CTO in US) point of view, I have been asked numerous times over the years to delete, suppress and change logs in a companies favour... I left said company eventually, but when it's the choice between destroying records and your job it's not always black and white, especially in times of financial crisis with debts and bills to pay
I never acted on any request I found uncomfortable and on occasion pretended I had, but my conscience made me leave that company in the end (and it was a well established luxury brand).
despite all the parts of it I had loved for years some things you can't be aware of and just carry on..
A lot of people turn a blind eye when it comes down to having work or not, it doesn't excuse any of it, but this happens A LOT in the real world
You can try and pretend shady dodgy business doesn't happen often in the world, but the reality is very different to how we would like things to work
We don't know the facts, but I think NDs statement comes across badly, that they categorically deny being aware of it over a weekend when checking this all out with the levels of people involved wouldn't be possible...