Apologies if this has been answered, but I did a quick search and didn't see it, also didn't see it mentioned on the Dolphin wiki.
I just reinstalled Dolphin now that I have a bluetooth adapter that likes my Wiimotes (Asus adapter "hacked" w/ Toshiba drivers, takes a couple GUIs but it does work fine!). I've tested Kirby's Epic Yarn, Rhythm Heaven and Skyward Sword so far and other than some frame slowdowns, which could be due to me trying to push a bit too much out of my somewhat aging hardware (i7-930 @ 3.2Ghz, GTX 460 1GB), everything looks great. I'm doing the automatic gfx bump based on resolution--less lag so far using that vs. the 1x-4x auto.
My problem is--in Twilight Princess (Wii), I can get to the intro, I can hit A+B together...but once it comes up with the menu and pointer, my controls immediately go dead. After a few seconds, the game claims the Wiimote has lost its connection, and it just sits there until I kill the emulation.
I've tested IR pointing, waggle, and even WiiMotion+--all work fine in other games. I also swapped out my controller for a non-WM+ since TP didn't support it--no change.
Ripped the game from my disc via Homebrew on the Wii, as all of these games were ripped.
I'm stumped D: Will keep googling around for an answer.