Same here! They're all ready for pickup except for the Villager. It's like he's totally disappeared off of bestbuy.com... like, you can't search for him and bring up his product page, even if you search his SKU that you can see if you browse your order. Weirdness...!
He's still there when you search for Amiibo, but is listed in the Amiibo for the December releases. You can still go to the product page from there. I have no idea what's going on but hopefully they got shipments. If not, I guess I'll just head over to Toys R Us since it's right next to the BB I'm going to.